| Name | Description |
|---|
| Format |
This parameter specifies which module properties to include in the output
as an ordered, comma-separated list of property names.
Note that standard properties are case-insensitive, but user-defined
properties are case-sensitive!
Standard module properties include:
- ID
- Cardinality
- Motifs
- Ordered
- Oriented
- Max length
- Max IC
- Min IC
- Logo
The name of a property can be followed by the name of another property within
parenthesis.
This second property will be displayed as a tooltip when the mouse is over the
table cell with the first property.
For example, the format string: "ID,Logo(Max IC)" will
create a table with two columns where
the first column will contain the module ID and the second a graphical module logo.
If the user points the mouse at the logo for a module, its maximum IC will
be displayed in a tooltip.
(Note that this might not work within MotifLab but should work if the HTML
document is saved to a file and displayed
in an external web browser).
|
| Logo max width |
The maximum width of module logos. If this is specified, logos will be scaled to fit
within this limit when necessary. A value of 0 means no limit.
|
| Logos |
Specifies whether the image files for module logos should be
made specifically for this output data object and given file names
reflecting this fact ("New images") or if the image files should be
named after the modules themselves (e.g. "MOD0003.gif") and allowed to be
shared by other HTML-formatted output data objects that also contain
logos for the same modules ("Shared images"). A third option is to
output logos using textual rather than graphical representations ("Text").
|
| multiline |
Some module properties may be represented by lists.
If the "multiline" option is selected,
these lists will be broken across multiple lines in a table cell. If the
"multiline" option is not selected, these properties will be output as
comma-separated lists.
|
| Headline |
An optional headline which will be displayed above the table.
|